species:   Drmel
pid:       MI0000430
parent:    dme-mir-318
paralog:   
locus:     NT_033777.3:10408302-10408369
matures:   ['UCACUGGGCUUUGUUUAUCUCA', 'GGAUACACACAGUUCAGUUUUG']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NT_033777.3:10408302-10408369

0 out of bounds
816 alignments
816 proper strand
800 stranded perfect matches

    ************************            ************************    
UUUAUGGGAUACACACAGUUCAGUUUUGUCACACUUCAAGCAUCACUGGGCUUUGUUUAUCUCAUGAG
.((((((((((.(((.((((((((..(((..........)))..)))))))).))).)))))))))).
------------------------------------------UCACUGGGCUUUGUUUAUCUCA---- l=22 a=637 c
------GGAUACACACAGUUCAGUUUUG---------------------------------------- l=22 a=0 c*
------------------------------------------UCACUGGGCUUUGUUUAUCUCA---- l=22 a=637 ma
------GGAUACACACAGUUCAGUUUUG---------------------------------------- l=22 a=0 ma*

------------------------------------------UCACUGGGCUUUGUUUAUC------- l=19 a=4 
------------------------------------------UCACUGGGCUUUGUUUAUCU------ l=20 a=22 
------------------------------------------UCACUGGGCUUUGUUUAUCUC----- l=21 a=135 
------------------------------------------UCAuUGGGCUUUGUUUAUCUC----- l=21 a=1 
------------------------------------------UCACUGGGCUUUuUUUAUCUC----- l=21 a=1 
------------------------------------------UCACUGuGCUUUGUUUAUCUC----- l=21 a=1 
------------------------------------------UCACUGGGCUUUGUUUAUCUCA---- l=22 a=637 (c,ma)
------------------------------------------UCACUGGGCUUUGUUUAUCcCA---- l=22 a=2 
------------------------------------------UCACUGGaCUUUGUUUAUCUCA---- l=22 a=1 
------------------------------------------UCACUGuGCUUUGUUUAUCUCA---- l=22 a=1 
------------------------------------------UCACUGGGCUUUGgUUAUCUCA---- l=22 a=1 
------------------------------------------UCACUGGGCUUUGUUUAUCUuA---- l=22 a=1 
------------------------------------------UCACUGGGCUUUGUUUAUCUCAa--- l=23 a=7 
------------------------------------------UCACUGGGCUUUGUUUAUCUCAU--- l=23 a=1 
-------------------------------------------CACUGGGCUUUGUUUAUCUCA---- l=21 a=1 

mb-01011
ax-1011111
ku-11
ss-111111111110
fn-111
